Extension Logo
Extension Logo
University of Minnesota Extension

Green stem syndrome on soybean

Green stem syndrome refers to plants that maintain green stems and sometimes leaves well past the time when they are normally brown and mature. The plant stems remain moist while the pods and seeds have ripened. Green stem does not have a clear effect on yield, but the green stems make harvesting more difficult. The cause is unknown, and the incidence of green stem varies from location to location in a given year and can differ among soybean cultivars planted in one location.


Stems of plants remain green after the pods and seeds have ripened and are brown and ready for harvest. Occasionally the stems and leaves remain green after the pods have matured, which is well past the time when the whole plant is normally brown and dry.

Conditions and timing that favor disease

Symptoms are typically first seen as the crop is maturing.

Causal pathogen

The cause of green stem syndrome is unknown. This syndrome has been attributed to many different causes. 

These include plant viruses, low soil moisture, potassium deficiency, soybean population density, genetic mutations in soybean plants, and insect damage. Plant viruses, especially bean pod mottle virus (BPMV), were thought to be associated with green stem, but recent research has shown no cause and effect relationship between BPMV infection and green stem. Specific viruses are often not detected in plants with green stem, and plants with specific viruses often don't have green stem.

Disease management

Plant soybean cultivars with relatively low susceptibility to green stem. The incidence and severity of green stem has been reported to vary among cultivars. Specific and proven management strategies are not known due to the uncertain cause of green stem syndrome.

Dean Malvick, Extension pathologist 

Reviewed in 2018

Page survey

© 2024 Regents of the University of Minnesota. All rights reserved. The University of Minnesota is an equal opportunity educator and employer.